Software

Our research group led or contributed to the following software projects:

  • ASPic, a computational approach to alternative splicing prediction. ASPic is mostly superseded by the following project, PIntron.
  • PIntron, a computational gene-structure prediction pipeline.
  • Heu-MCHC, a fast and accurate heuristic algorithm for the haplotype inference problem on pedigree data with recombinations and mutations.
  • reHCstar, a fast and accurate algorithm for the haplotype inference problem on pedigree data with recombinations, errors and mutations. This algorithm is based on the SAT solver cryptominisat.